‘Publications’

Publication – Burghardt

Ultrafast C_spiro-O Dissociation via a Conical Intersection Drives Spiropyrane to Merocyanine Photoswitching.

Prager S, Burghardt I, Dreuw A. J Phys Chem A. 2014 Feb 27. Abstract Read more …

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Publication – Schleiff, Bohnsack

The evolution of the ribosome biogenesis pathway from a yeast perspective.

Ebersberger I, Simm S, Leisegang MS, Schmitzberger P, Mirus O, von Haeseler A, Bohnsack MT, Schleiff E. Nucleic Acids Res. 2014 Feb 1. Abstract Read more …

Publication – Rother, Suess

Development of β-Lactamase as a Tool for Monitoring Conditional Gene Expression by a Tetracycline-Riboswitch in Methanosarcina acetivorans.

Demolli S, Geist M, Weigand J, Matschiavelli N, Suess B and Rother M. Archaea, 2014 Jan 20. Abstract Read more …

Publication – Schwalbe, Heckel

Influence of the absolute configuration of npe-caged cytosine on DNA single base pair stability.

Steinert HS, Schäfer F, Jonker HR, Heckel A, Schwalbe H. Angew Chem Int Ed Engl, 2014 Jan 20. Abstract Read more …

Publication – Schwalbe

RNA refolding studied by light-coupled NMR spectroscopy.

Schwalbe H, Fürtig B. Methods Mol Biol, 2014. Abstract Read more …

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Publication – Schwalbe, Heckel

Characterization of the conformational dynamics of bistable RNAs by equilibrium and non-equilibrium NMR methods.

Fürtig B, Reining A, Sochor F, Oberhauser EM, Heckel A, Schwalbe H. Curr. Prot. in Nucl. Acid Chem., 2013 Dec. Abstract Read more …

Publication – Heckel

Spiropyran Photoswitches in the Context of DNA: Synthesis and Photochromic Properties.

Brieke C, Heckel A. Chemistry. 2013 Nov 11. Abstract Read more …

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Publication – Heckel

Aptamer-guided caging for selective masking of protein domains.

Rohrbach F1, Schäfer F, Fichte MA, Pfeiffer F, Müller J, Pötzsch B, Heckel A, Mayer G. Angew Chem Int Ed Engl. 2013 Nov 4. Abstract Read more …

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Publication – Heckel, Dimmeler

Regulation der Angiogenese durch lichtinduzierbare AntimiRs.

Schäfer F, Wagner J, Knau A, Dimmeler S, Heckel A. Angew Chem 2013 Oct 31. Abstract Read more …

Publication – Schuman

The central dogma decentralized: new perspectives on RNA function and local translation in neurons.

Holt CE, Schuman EM. Neuron. 2013 Oct 30. Abstract Read more …

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Publication – Suess

Monitoring the expression level of coding and non-coding RNAs using a TetR inducing aptamer tag.

Meitert J, Aram R, Wiesemann K, Weigand JE, Suess B. Bioorg Med Chem, 2013 Oct 15. Abstract Read more …

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Publication – Tampé

In-situ spin labeling of his-tagged proteins: distance measurements under in-cell conditions.

Baldauf C, Schulze K, Lueders P, Bordignon E, Tampé R. Chemistry. 2013 Oct 4. Abstract Read more …

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Publication – Wöhnert

Backbone resonance assignments for a homolog of the essential ribosome biogenesis factor Fap7 from P. horikoshii in its nucleotide-free and -bound forms.

Hellmich UA, Wöhnert J. Biomol NMR Assign. 2013 Oct. Abstract Read more …

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Publication – Wöhnert, Schleiff

Essential ribosome assembly factor Fap7 regulates a hierarchy of RNA-protein interactions during small ribosomal subunit biogenesis.

Hellmich UA, Weis BL, Lioutikov A, Wurm JP, Kaiser M, Christ NA, Hantke K, Kötter P, Entian KD, Schleiff E, Wöhnert J. Proc Natl Acad Sci U S A. 2013 Sep 17. Abstract Read more …

Publication – Rother

Random mutagenesis identifies factors involved in formate-dependent growth of the methanogenic archaeon Methanococcus maripaludis.

Sattler C, Wolf S, Fersch J, Goetz S, Rother M. Mol Genet Genomics. 2013 Sep. Abstract Read more …

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Publication – Schuman

Proteostasis in complex dendrites.

Hanus C, Schuman EM. Nat Rev Neurosci. 2013 Sep. Abstract Read more …

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Publication – Wöhnert

Backbone and side chain NMR assignments for the ribosome assembly factor Nop6 from Saccharomyces cerevisiae

Wurm JP, Lioutikov A, Kötter P, Entian KD, Wöhnert J. Biomol NMR Assign. 2013 Aug 7. Abstract Read more …

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Publication – Dimmeler, Suess

Regulation of miR-17-92a cluster processing by the microRNA binding protein SND1.

Heinrich EM, Wagner J, Krüger M, John D, Uchida S, Weigand JE, Suess B, Dimmeler S. FEBS Lett, 2013 Aug 2. Abstract Read more …

Publication – Heckel

Rapid synthetic access to caged RNA.

Rodrigues-Correia A, Stoess T, Wilhelm J, Berlin B, Heckel A. IJC-A. 2013 Aug. Abstract Read more …

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Nature Publication – Schwalbe

Three-state mechanism couples ligand and temperature sensing in riboswitches.

Reining A, Nozinovic S, Schlepckow K, Buhr F, Fürtig B, Schwalbe H. Nature 2013 Jul 18. Abstract Read more …

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Publication – Wöhnert

Recognition of two distinct elements in the RNA substrate by the RNA-binding domain of the T. thermophilus DEAD box helicase Hera.

Steimer L, Wurm JP, Linden MH, Rudolph MG, Wöhnert J, Klostermeier D. Nucleic Acids Res. 2013 Jul. Abstract Read more …

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Publication – Suess

Synthetic riboswitches for the conditional control of gene expression in Streptomyces coelicolor.

Rudolph MM, Vockenhuber MP, Suess B. Microbiology, 2013 Jul. Abstract Read more …

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Publication – Schuman

Axonal translation of β-catenin regulates synaptic vesicle assembly.

Taylor AM, Wu J, Tai HC, Schuman EM. J Neurosci, 2013 Mar 27. Abstract Read more …

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Publication – Schuman

A mutant methionyl-tRNA synthetase from bacteria enables site-selective N-terminal labeling of proteins expressed in mammalian cells.

Ngo JT, Schuman EM, Tirrell DA. Proc Natl Acad Sci U S A, 2013 March 11. Abstract Read more …

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Nature Publication – Dimmeler

MicroRNA-34a regulates cardiac ageing and function.

Boon RA, Iekushi K, Lechner S, Seeger T, Fischer A, Heydt S, Kaluza D, Tréguer K, Carmona G, Bonauer A, Horrevoets AJ, Didier N, Girmatsion Z, Biliczki P, Ehrlich JR, Katus HA, Müller OJ, Potente M, Zeiher AM, Hermeking H, Dimmeler S. Nature 2013 Mar 7. Abstract Read more …

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The Remarkable Neuron – Erin Schuman

Prof. Erin Schuman (B1), Director of the Max Planck Institute for Brain Research presented her work at the TEDx Caltech conference.

On January 18, 2013, Caltech hosted TEDxCaltech: The Brain, a forward-looking celebration of humankind’s quest to understand the brain, by exploring the past, present and future of neuroscience. Erin Schuman presented her work on protein synthesis at the synapses. Her presentation was titled “The Remarkable Neuron” was recently put online and can be found on YouTube (http://www.youtube.com/watch?v=yr6kh_QOk0s) or on the website of TEDxCaltech. Read more …

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Publication – Tampé

Tying up loose ends: ribosome recycling in eukaryotes and archaea.

Nürenberg E, Tampé R. Trends Biochem Sci. 2013 Feb. Abstract Read more …

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Publication – Bohnsack, Schleiff

40S Ribosome Biogenesis Co-Factors Are Essential for Gametophyte and Embryo Development.

Missbach S, Weis BL, Martin R, Simm S, Bohnsack MT, Schleiff E. PLoS One, 2013 Jan 30. Abstract Read more …

Publication – Prisner

An algorithm to analyze PELDOR data of rigid spin label pairs.

Marko A, Prisner TF. Phys Chem Chem Phys. 2013 Jan 14. Abstract Read more …

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Publication – Tampé

Control of nanomolar interaction and in situ assembly of proteins in four dimensions by light.

Labòria N, Wieneke R, Tampé R. Angew Chem Int Ed Engl. 2013 Jan 14. Abstract Read more …

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Publication – Bohnsack

DExD/H-box RNA helicases in ribosome biogenesis.

Martin R, Straub AU, Doebele C, Bohnsack MT. RNA Biol. 2013 Jan. Abstract Read more …

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Publication – Prisner

Structure and conformational dynamics of RNA determined by pulsed EPR.

Krstić I, Marko A, Grytz CM, Endeward B, Prisner TF. As Chapter 11 in RNA Structure and Folding. 2013. Hrsg. v. Klostermeier, Dagmar und Hammann, Christian, deGruyter, (2013) ISBN: 978-3-11-028495-9A4.

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Publication – Heckel, Wachtveitl

Ultrafast Dynamics of a Spiropyran in Water.

Kohl-Landgraf J, Braun M, Ozçoban C, Gonçalves DP, Heckel A, Wachtveitl J. J Am Chem Soc, 2012 August 14. Abstract Read more …

Publication – Schuman

Dopaminergic modulation of the hippocampal neuropil proteome identified by bioorthogonal noncanonical amino acid tagging (BONCAT).

Hodas JJ, Nehring A, Höche N, Sweredoski MJ, Pielot R, Hess S, Tirrell DA, Dieterich DC, Schuman EM. Proteomics, 2012 Aug 12. Abstract Read more …

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Publication – Suess

Engineered riboswitches: Expanding researchers’ toolbox with synthetic RNA regulators.

Wittmann A, Suess B. FEBS Lett, 2012 Jul 16. Abstract Read more …

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Publication – Suess

Biochemical analysis of the complex between the tetrameric export adapter protein Rec of HERV-K/HML-2 and the responsive RNA element RcRE pck30.

Langner JS, Fuchs NV, Hoffmann J, Wittmann A, Brutschy B, Löwer R, Suess B. J Virol, 2012 Jun 13. Abstract Read more …

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Publication – Schuman

State-selective metabolic labeling of cellular proteins.

Ngo JT, Babin BM, Champion JA, Schuman EM, Tirrell DA. ACS Chem Biol, 2012 Aug 17. Abstract Read more …

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Publication – Schuman

The local transcriptome in the synaptic neuropil revealed by deep sequencing and high-resolution imaging.

Cajigas IJ, Tushev G, Will TJ, Tom Dieck S, Fuerst N, Schuman EM. Neuron, 2012 May 10. Abstract Read more …

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Publication – Schwalbe, Wöhnert

Mechanisms for differentiation between cognate and near-cognate ligands by purine riboswitches.

Wacker A, Buck J, Richter C, Schwalbe H, Wöhnert J. RNA Biol, 2012 May 1. Abstract Read more …

Publication – Dimmeler

Regulation of cardiac microRNAs by bone marrow mononuclear cell therapy in myocardial infarction.

Iekushi K, Seeger F, Assmus B, Zeiher AM, Dimmeler S. Circulation. 2012 Apr 10. Abstract Read more …

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Publication – Wöhnert, Bohnsack, Schleiff

Backbone and side chain NMR resonance assignments for an archaeal homolog of the endonuclease Nob1 involved in ribosome biogenesis.

Veith T1, Wurm JP, Duchardt-Ferner E, Weis B, Martin R, Safferthal C, Bohnsack MT, Schleiff E, Wöhnert J. Biomol NMR Assign. 2012 Apr. Abstract Read more …

Publication – Schwalbe, Wöhnert

RNA as drug target, in NMR of Biomolecules: Towards Mechanistic Systems Biology.

Ferner JP, Duchardt-Ferner E, Rinnenthal J, Buck J, Wöhnert J, Schwalbe H. NMR of Biomolecules: Towards Mechanistic Systems Biology, 2012 Mar. Abstract Read more …

Publication – Schwalbe, Dreuw

The Nature of Hydrogen Bonds in Cytidine⋅⋅⋅H+⋅⋅⋅Cytidine DNA Base Pairs.

Lieblein AL, Krämer M, Dreuw A, Fürtig B, Schwalbe H. Angew Chem Int Ed Engl, 2012 Mar 12. Abstract Read more …

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Publication – Suess

Post-transcriptional regulation of 5-lipoxygenase mRNA expression via alternative splicing and nonsense-mediated mRNA decay.

Ochs MJ, Sorg BL, Pufahl L, Grez M, Suess B, Steinhilber D. PLoS One, 2012 Feb 21. Abstract Read more …

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Publication – Heckel, Soppa, Wöhnert

Identification of the enzyme responsible for N1-methylation of pseudouridine 54 in archaeal tRNAs.

Wurm JP, Griese M, Bahr U, Held M, Heckel A, Karas M, Soppa J, Wöhnert J. RNA, 2012 Jan 24. Abstract Read more …

Publication – Dimmeler, Frangakis

Atheroprotective communication between endothelial cells and smooth muscle cells through miRNAs.

Hergenreider E, Heydt S, Tréguer K, Boettger T, Horrevoets AJ, Zeiher AM, Scheffer MP, Frangakis AS, Yin X, Mayr M, Braun T, Urbich C, Boon RA, Dimmeler S. Nat Cell Biol, 2012 Feb 12. Abstract Read more …

Publication – Schuman

Non-canonical amino acid labeling in vivo to visualize and affinity purify newly synthesized proteins in larval zebrafish.

Hinz FI, Dieterich DC, Tirrell DA, Schuman EM. ACS Chem Neurosci, 2012 Jan 18. Abstract Read more …

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Publication – Bohnsack

Identification of RNA helicase target sites by UV cross-linking and analysis of cDNA.

Bohnsack MT, Tollervey D, Granneman S. Methods Enzymol. 2012. Abstract Read more …

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Publication – Schwalbe

Nucleic Acids, in NMR of Biomolecules: Towards Mechanistic Systems Biology.

Cevec M, Jonker HRA, Nozinovic S, Richter C, Schwalbe H. NMR of Biomolecules: Towards Mechanistic Systems Biology, 2012 Mar. Abstract Read more …

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Publication – Schwalbe

Functional dynamics of RNA ribozymes studied by NMR spectroscopy.

Fürtig B, Buck J, Richter C, Schwalbe H. Methods Mol Biol, 2012. Abstract Read more …

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