Posts Tagged ‘Schwalbe’

Publication – Fürtig, Schwalbe

Conformational switch in the ribosomal protein S1 guides unfolding of structured RNAs for translation initiation.

N.S. Qureshi, S. Sreeramulu, J.K. Bains, H. Schwalbe*, B. Fürtig*

Nucleic Acids Res. in press

 

Publication – Heckel, Schwalbe

Chemo-enzymatic synthesis of position-specifically modified RNA for biophysical studies including light control and NMR spectroscopy.

Schwalbe H, Keyhani S, Goldau T, Blümler A, Heckel A.
Angew Chem Int Ed Engl. 2018

Full publication here: Chemo-enzymatic synthesis of position-specifically modified RNA for biophysical studies including light control and NMR spectroscopy.

Abstract:  Read more …

Publication – Fürtig, Schwalbe, Wöhnert

Evaluation of 15N-detected H-N correlation experiments on increasingly large RNAs.

Schnieders R, Richter C, Warhaut S, de Jesus V, Keyhani S, Duchardt-Ferner E, Keller H, Wöhnert J, Kuhn LT, Breeze AL, Bermel W, Schwalbe H, Fürtig B.
J. Biomol. NMR, 2017 Sep 6.

Full publication here: Evaluation of 15N-detected H–N correlation experiments on increasingly large RNAs

Abstract:  Read more …

Publication – Schwalbe, Süß, Wöhnert, Fürtig

Pausing guides RNA folding to populate transiently stable RNA structures for riboswitch-based transcription regulation.

Steinert’ H, Sochor’ F, Wacker A, Buck J, Helmling C, Hiller F, Keyhani S, Noeske J, Grimm S, Rudolph MM, Keller H, Mooney RA, Landick R, Süß B, Fürtig B, Wöhnert J, Schwalbe H. eLife. 2017 May 25. Abstract Read more …

Publication – Schwalbe, Heilemann, Fürtig, Hengesbach

Ligand-modulated folding of the full-length adenine riboswitch probed by NMR and single-molecule FRET spectroscopy.

SWarhaut S, Mertinkus KR, Höllthaler P:, Fürtig B, Heilemann M, Hengesbach M, Schwalbe H.
Nucl. Acids Res., 2017 May 19.

Full publication here: Ligand-modulated folding of the full-length adenine riboswitch probed by NMR and single-molecule FRET spectroscopy.

Abstract:  Read more …

Publication – Schwalbe, Sigurdsson

Impact of spin label rigidity on extent and accuracy of distance information from PRE data.

Schnorr KA, Gophane DB, Helmling C, Cetiner E, Pasemann K, Fürtig B, Wacker A, Qureshi NS, Gränz M, Barthelmes D, Jonker HRA, Stirnal E, Sigurdsson ST, Schwalbe H.
Nucleic Acids Research, 2017 May 12.

Full publication here: Impact of spin label rigidity on extent and accuracy of distance information from PRE data.

Abstract:  Read more …

Publication – Schwalbe, Fürtig, Hengesbach

NMR structural profiling of transcriptional intermediates reveals riboswitch regulation by metastable RNA conformations.

Helmling CWacker AWolfinger MTHofacker ILHengesbach MFürtig BSchwalbe H.
J. Am. Chem. Soc., 2017 Jan 30.

Full publication here: NMR structural profiling of transcriptional intermediates reveals riboswitch regulation by metastable RNA conformations.

Abstract:  Read more …

Publication – Schwalbe, Süß

Ligand binding to 2΄-deoxyguanosine sensing riboswitch in metabolic context

Kim YB, Wacker A, von Laer K, Rogov VV, Suess B, Schwalbe H.
Nucleic Acids Res, 2017 Jan 23. Abstract   Read more …

Publication – Dimmeler, Schwalbe

Adenosine-to-inosine RNA editing controls cathepsin S expression in atherosclerosis by enabling HuR-mediated post-transcriptional regulation

Stellos K., Gatsiou A, Stamatelopoulos K, Perisic Matic L, John D, Lunella FF, Jaé N, Rossbach O, Amrhein C, Sigala F, Boon RA, Fürtig B, Manavski Y, You X, Uchida S, Keller T, Boeckel JN, Franco-Cereceda A, Maegdefessel L, Chen W, Schwalbe H, Bindereif A, Eriksson P, Hedin U, Zeiher AM, Dimmeler S Nature Medicine 2016 Sep 5. Abstract   Read more …

Publication – Schwalbe, Heckel, Wachtveitl

Photoresponsive Formation of an Intermolecular Minimal G-Quadruplex Motif.

Thevarpadam J, Bessi I, Binas O, Gonçalves DP, Slavov C, Jonker HR, Richter C, Wachtveitl J, Schwalbe H, Heckel A. Angew Chem Int Ed Engl. 2016 Feb 18. Abstract  Read more …

Publication – Fürtig, Schwalbe

Direct 13C-detected NMR Experiments for Mapping and Characterization of Hydrogen Bonds in RNA.

Fürtig B, Schnieders R, Richter C, Zetzsche H, Keyhani S, Helmling C, Kovacs H, Schwalbe H.
J. Biomol. NMR, 2016 Feb 6.

Full publication here: Direct 13C-detected NMR Experiments for Mapping and Characterization of Hydrogen Bonds in RNA.

Abstract:  Read more …

Publication – Schwalbe

19F-labeling of the adenine H2-site to study large RNAs by NMR spectroscopy.

Sochor F, Silvers R, Müller D, Richter C, Fürtig B, Schwalbe H. J Biomol NMR. 2015 Dec 24. Abstract Read more …

Publication – Schwalbe, Fürtig, Hengesbach

Rapid NMR screening of RNA secondary structure and binding.

Helmling C, Keyhani S, Sochor F, Fürtig B, Hengesbach M, Schwalbe H. J. Biomol. NMR., 2015 Jul 19. Abstract Read more …

Publication – Schwalbe

Mechanistic insights into temperature-dependent regulation of the simple cyanobacterial hsp17 RNA thermometer at base-pair resolution.

Wagner D, Rinnenthal J, Narberhaus F, Schwalbe H. Nucleic Acids Res. 2015 Jun 23. Abstract Read more …

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Publication – Hengesbach, Schwalbe

Differential scanning fluorimetry for monitoring RNA stability.

Silvers R, Keller H, Schwalbe H, Hengesbach M. Chembiochem 2015 May.
Full publication here. Read more …

Publication – Schwalbe

Multiple conformational states of riboswitches fine-tune gene regulation.

Fürtig B, Nozinovic S, Reining A, Schwalbe H. Curr Opin Struct Biol. 2015 Feb. Abstract Read more …

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Publication – Wachtveitl, Schwalbe

Mechanism of the photoinduced uncaging reaction of puromycin protected by a 6-nitroveratryloxycarbonyl group.

Kohl-Landgraf J, Buhr F, Lefrancois D, Mewes JM, Schwalbe H, Dreuw A, Wachtveitl J. J Am Chem Soc, 2014 Mar 05. Abstract Read more …

Publication – Schwalbe, Heckel

Influence of the absolute configuration of npe-caged cytosine on DNA single base pair stability.

Steinert HS, Schäfer F, Jonker HR, Heckel A, Schwalbe H. Angew Chem Int Ed Engl, 2014 Jan 20. Abstract Read more …

Publication – Schwalbe

RNA refolding studied by light-coupled NMR spectroscopy.

Schwalbe H, Fürtig B. Methods Mol Biol, 2014. Abstract Read more …

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Publication – Schwalbe, Heckel

Characterization of the conformational dynamics of bistable RNAs by equilibrium and non-equilibrium NMR methods.

Fürtig B, Reining A, Sochor F, Oberhauser EM, Heckel A, Schwalbe H. Curr. Prot. in Nucl. Acid Chem., 2013 Dec. Abstract Read more …

Nature Publication – Schwalbe

Three-state mechanism couples ligand and temperature sensing in riboswitches.

Reining A, Nozinovic S, Schlepckow K, Buhr F, Fürtig B, Schwalbe H. Nature 2013 Jul 18. Abstract Read more …

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Publication – Schwalbe, Wöhnert

Mechanisms for differentiation between cognate and near-cognate ligands by purine riboswitches.

Wacker A, Buck J, Richter C, Schwalbe H, Wöhnert J. RNA Biol, 2012 May 1. Abstract Read more …

Publication – Schwalbe, Wöhnert

RNA as drug target, in NMR of Biomolecules: Towards Mechanistic Systems Biology.

Ferner JP, Duchardt-Ferner E, Rinnenthal J, Buck J, Wöhnert J, Schwalbe H. NMR of Biomolecules: Towards Mechanistic Systems Biology, 2012 Mar. Abstract Read more …

Publication – Schwalbe, Dreuw

The Nature of Hydrogen Bonds in Cytidine⋅⋅⋅H+⋅⋅⋅Cytidine DNA Base Pairs.

Lieblein AL, Krämer M, Dreuw A, Fürtig B, Schwalbe H. Angew Chem Int Ed Engl, 2012 Mar 12. Abstract Read more …

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Publication – Schwalbe

Nucleic Acids, in NMR of Biomolecules: Towards Mechanistic Systems Biology.

Cevec M, Jonker HRA, Nozinovic S, Richter C, Schwalbe H. NMR of Biomolecules: Towards Mechanistic Systems Biology, 2012 Mar. Abstract Read more …

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Publication – Schwalbe

Functional dynamics of RNA ribozymes studied by NMR spectroscopy.

Fürtig B, Buck J, Richter C, Schwalbe H. Methods Mol Biol, 2012. Abstract Read more …

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Publication – Schwalbe

Mapping the landscape of RNA dynamics with NMR spectroscopy.

Rinnenthal J, Buck J, Ferner J, Wacker A, Fürtig B, Schwalbe H. Acc Chem Res, 2011 Dec 20. Abstract Read more …

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Publication – Wöhnert, Schwalbe

Influence of ground-state structure and Mg2+ binding on folding kinetics of the guanine-sensing riboswitch aptamer domain.

Buck J, Wacker A, Warkentin E, Wöhnert J, Wirmer-Bartoschek J, Schwalbe H. Nucleic Acids Res, 2011 Sept 2. Abstract Read more …

Publication – Wöhnert, Schwalbe

Structure and dynamics of the deoxyguanosine-sensing riboswitch studied by NMR-spectroscopy.

Wacker A, Buck J, Mathieu D, Richter C, Wöhnert J, Schwalbe H. Nucleic Acids Res, 2011 Aug. Abstract Read more …

Publication – Schwalbe

Determination of the conformation of the 2’OH group in RNA by NMR spectroscopy and DFT calculations.

Nozinovic S, Gupta P, Fürtig B, Richter C, Tüllmann S, Duchardt-Ferner E, Holthausen MC, Schwalbe H. Angew Chem Int Ed Engl, 2011. Abstract Read more …

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